Find and plot potential ORFs — plot_ORFs_in

By Coghlan (2011) A little book of R for bioinformatics. https://a-little-book-of-r-for-bioinformatics.readthedocs.io/en/latest/. This function calls find_start_stop_ORFs() thenm builds a plot of the output. Predictions are based on the standard genetic code.

plot_ORFs_in_seq(sq)

Arguments

sq	DNA sequence

Examples

# From Coglan 2011
## Toy example
s1 <- "aaaatgcagtaacccatgccc"
plot_ORFs_in_seq(s1)

## Dengue virus example
data(dengueseqstartstring)
plot_ORFs_in_seq(dengueseqstartstring)